Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808069.1_cds_XP_016495132.1_9478
CDS Infomation

[gene=LOC107814266] [db_xref=GeneID:107814266] [protein=cystathionine gamma-synthase 1, chloroplastic-like] [protein_id=XP_016495132.1] [location=complement(join(82154..82277,82776..82894,82981..83076,83878..83985,84318..84404,84499..84702,84795..84854,85154..85322,85412..85485,85999..86102,86530..87043))] [gbkey=CDS]
Sequence

ATGGCCGTTTCAAGCTGTGCAGCTGCAGCTAGGGCATTTCCATCCTTCGAATGCCGTTCC
GACGCCGACTTCTCCGCCGGCGGCGTTCCACGTCACAACGACGTTCCAAAAAACTCCTCC
GGCGTCCGTTTCTCCGGCAAGGCAAACTCGTTAAATCACGGATCGTCGATTCACGGTGGC
ATGTCTTCTCTGATCCTTAGGTTTCCGCCAAACTTCGTGCGGCAACTGAGCGTCAAAGCT
CGTCGGAACTGCAGCAACATCGGCGTTGCACAAGTCGTTGCGGCTTCCTGGTCAAACAAC
CTCGGTTCCCCTGACTTCACTCCGGCGGCGACTAAGGCCGTTGATGCCTCAGCCGCCGCC
GCCGCTGCCGTTGCTCCTGTTGATGAGGAGGTGACGGTAATGGTGGAAAATGAAAATCCG
GCTTGTGATGATCGAAATGTACAGATTGAGGAGGTGACACGGGGAAAATATTCTTCGTTT
TTGAGTTCTGATGGAAGTATTGCTATTCATGCCGGTGAGAGGTTAGGACGTGGTATTGTT
ACTGATGCAATAACTACCCCAGTGGTTAATACGTCTGCTTATTTCTTCAAGAAGACTTCT
GAGCTCATTGATTTCAAGGAGAAAAGACATGCAAGTTTTGAATATGGGCGCTATGGAAAC
CCCACTACTGTTGTTGCTGAGGAGAAGATAAGTGCACTGGAAGGTGCTGAATCAACCTTG
TTAATGGCATCTGGAATGTGTGCGAGTACTGTAATGTTGTTGGCATTAGTTCCTGCTGGT
GGACATATTGTAACAACAACAGATTGCTACAGAAAGACCCGGATATTTATTGAGACAATA
CTGCCTAAAATGGGAATCACGGCCACAGTCATTGACCCAGCTGATATTGGAGCTCTAGAG
TCAGTCCTAAAACAGAAGAAAGTGACTCTTTTCTTTACCGAGTCTCCAACAAATCCATTC
CTGAGATGTGTTGACATTGAGCTGGTATCAAAGCTTTGCCATGAAAATGGAGCATTGGTT
TGCATCGATGGGACATTTGCAACTCCTCTTAACCAAAAGGCCCTTGCTCTAGGGGCTGAC
CTCGTTGTGCACTCTGCAACAAAATATATTGGTGGCCACAATGATGTTCTTGCTGGTTGC
ATTAGTGGACCTGAAAAGTTAGTTTCAGTAATTCGTAACTTGCATCATATCCTGGGTGGT
GCTATCAATCCGAATGCTGCGTATTTGATCATCAGAGGTATGAAGACGCTGCATCTTCGT
GTACAGCAACAGAACTCAACTGCGCAAAGGATAGCCGAAATTTTAGAGGCTCATCCCAAG
GTGAGATGTGTCTATTATCCAGGCTTGCCGAGTCATCCAGAACATCAGCTGGCAAAGAAA
CAAATGACTGGTTTTGGTGGTGTGGTCAGCTTTGAGGTTGATGGGGATCTGCTGACTACT
GCAAAATTCATTGATGCTCTGAAAATTCCTTATATTGCTCCATCATTTGGAGGCTGCGAG
AGCATTGTGGATCAACCAGCAATAATGTCTTACTGGGATCTTAGCCAGTCAGACAGAGCA
AAGTATGGGATCTTGGACAACTTGGTTCGATTCAGCTTTGGAGTGGAAGACTTTGAGGAT
TTGAAAGCTGATATTCTTCAGGCTCTGGATACCATATAG

Peptide Sequence

PEP ID

XP_016495132.1
PEP Infomation

PREDICTED: cystathionine gamma-synthase 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MAVSSCAAAARAFPSFECRSDADFSAGGVPRHNDVPKNSSGVRFSGKANSLNHGSSIHGG
MSSLILRFPPNFVRQLSVKARRNCSNIGVAQVVAASWSNNLGSPDFTPAATKAVDASAAA
AAAVAPVDEEVTVMVENENPACDDRNVQIEEVTRGKYSSFLSSDGSIAIHAGERLGRGIV
TDAITTPVVNTSAYFFKKTSELIDFKEKRHASFEYGRYGNPTTVVAEEKISALEGAESTL
LMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADIGALE
SVLKQKKVTLFFTESPTNPFLRCVDIELVSKLCHENGALVCIDGTFATPLNQKALALGAD
LVVHSATKYIGGHNDVLAGCISGPEKLVSVIRNLHHILGGAINPNAAYLIIRGMKTLHLR
VQQQNSTAQRIAEILEAHPKVRCVYYPGLPSHPEHQLAKKQMTGFGGVVSFEVDGDLLTT
AKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGILDNLVRFSFGVEDFED
LKADILQALDTI

Transcript Sequence

Gene sequence data has not been registered.